Items where NERC Author is "Oliver, Anna"

Woodcock, Ben A. ORCID: https://orcid.org/0000-0003-0300-9951; Oliver, Anna E.; Newbold, Lindsay K. ORCID: https://orcid.org/0000-0001-8895-1406; Gweon, H. Soon; Read, Daniel S. ORCID: https://orcid.org/0000-0001-8546-5154; Sayed, Ujala; Savage, Joanna; Bacon, Jim; Upcott, Emily; Howell, Katherine; Turvey, Katharine; Roy, David B. ORCID: https://orcid.org/0000-0002-5147-0331; Pereira, M. Gloria ORCID: https://orcid.org/0000-0003-3740-0019; Sleep, Darren ORCID: https://orcid.org/0009-0002-1128-1883; Greenop, Arran; Pywell, Richard ORCID: https://orcid.org/0000-0001-6431-9959. 2022 Citizen science monitoring reveals links between honeybee health, pesticide exposure and seasonal availability of floral resources. Scientific Reports, 12, 14331. 13, pp. https://doi.org/10.1038/s41598-022-18672-0

Schönrogge, K. ORCID: https://orcid.org/0000-0003-0122-6493; Gibbs, M. ORCID: https://orcid.org/0000-0002-4091-9789; Oliver, A.; Cavers, S. ORCID: https://orcid.org/0000-0003-2139-9236; Gweon, H.S. ORCID: https://orcid.org/0000-0002-6218-6301; Ennos, R.A.; Cottrell, J.; Iason, G.R.; Taylor, J.. 2022 Environmental factors and host genetic variation shape the fungal endophyte communities within needles of Scots pine (Pinus sylvestris). Fungal Ecology, 57-58, 101162. 10, pp. https://doi.org/10.1016/j.funeco.2022.101162

Woodcock, Ben A. ORCID: https://orcid.org/0000-0003-0300-9951; Ridding, Lucy; Pereira, M. Gloria ORCID: https://orcid.org/0000-0003-3740-0019; Sleep, Darren ORCID: https://orcid.org/0009-0002-1128-1883; Newbold, Lindsay ORCID: https://orcid.org/0000-0001-8895-1406; Oliver, Anna; Shore, Richard F.; Bullock, James M. ORCID: https://orcid.org/0000-0003-0529-4020; Heard, Matthew S.; Gweon, Hyun S.; Pywell, Richard F. ORCID: https://orcid.org/0000-0001-6431-9959. 2021 Neonicotinoid use on cereals and sugar beet is linked to continued low exposure risk in honeybees. Agriculture, Ecosystems and Environment, 308, 107205. 8, pp. https://doi.org/10.1016/j.agee.2020.107205

Merino-Martin, Luis; Stokes, Alexia; Gweon, Hyun S. ORCID: https://orcid.org/0000-0002-6218-6301; Moragues-Saitua, Lur; Staunton, Siobhan; Plassard, Claude; Oliver, Anna; Le Bissonnais, Yves; Griffiths, Robert I. ORCID: https://orcid.org/0000-0002-3341-4547. 2021 Interacting effects of land use type, microbes and plant traits on soil aggregate stability. Soil Biology and Biochemistry, 154, 108072. 19, pp. https://doi.org/10.1016/j.soilbio.2020.108072

Hilton, Sally; Picot, Emma; Schreiter, Susanne; Bass, David; Norman, Keith; Oliver, Anna E.; Moore, Jonathan D.; Mauchline, Tim H.; Mills, Peter R.; Teakle, Graham R.; Clark, Ian M.; Hirsch, Penny R.; van der Gast, Christopher J.; Bending, Gary D.. 2021 Identification of microbial signatures linked to oilseed rape yield decline at the landscape scale. Microbiome, 9, 19. 15, pp. https://doi.org/10.1186/s40168-020-00972-0

Gweon, Hyun S. ORCID: https://orcid.org/0000-0002-6218-6301; Bowes, Michael J. ORCID: https://orcid.org/0000-0002-0673-1934; Moorhouse, Heather L.; Oliver, Anna E.; Bailey, Mark J.; Acreman, Michael C.; Read, Daniel S. ORCID: https://orcid.org/0000-0001-8546-5154. 2021 Contrasting community assembly processes structure lotic bacteria metacommunities along the river continuum. Environmental Microbiology, 23 (1). 484-498. https://doi.org/10.1111/1462-2920.15337

Oliver, Anna E.; Newbold, Lindsay K. ORCID: https://orcid.org/0000-0001-8895-1406; Gweon, Hyun S.; Read, Daniel S. ORCID: https://orcid.org/0000-0001-8546-5154; Woodcock, Ben A. ORCID: https://orcid.org/0000-0003-0300-9951; Pywell, Richard F. ORCID: https://orcid.org/0000-0001-6431-9959. 2021 Integration of DNA extraction, metabarcoding and an informatics pipeline to underpin a national citizen science honey monitoring scheme. MethodsX, 8, 101303. 7, pp. https://doi.org/10.1016/j.mex.2021.101303

Merino-Martin, Luis; Griffiths, Robert I. ORCID: https://orcid.org/0000-0002-3341-4547; Gweon, Hyun S. ORCID: https://orcid.org/0000-0002-6218-6301; Furget-Bretagnon, Clément; Oliver, Anna; Mao, Zhun; Le Bissonnais, Yves; Stokes, Alexia. 2020 Rhizosphere bacteria are more strongly related to plant root traits than fungi in temperate montane forests: insights from closed and open forest patches along an elevational gradient. Plant and Soil, 450 (1-2). 183-200. https://doi.org/10.1007/s11104-020-04479-3

Cuthbertson, Leah; Walker, Alan W.; Oliver, Anna E.; Rogers, Geraint B.; Rivett, Damian W.; Hampton, Thomas H.; Ashare, Alix; Elborn, J. Stuart; De Soyza, Anthony; Carroll, Mary P.; Hoffman, Lucas R.; Lanyon, Clare; Moskowitz, Samuel M.; O’Toole, George A.; Parkhill, Julian; Planet, Paul J.; Teneback, Charlotte C.; Tunney, Michael M.; Zuckerman, Jonathan B.; Bruce, Kenneth D.; van der Gast, Christopher J.. 2020 Lung function and microbiota diversity in cystic fibrosis. Microbiome, 8, 45. 13, pp. https://doi.org/10.1186/s40168-020-00810-3

de Vries, Franciska T.; Griffiths, Rob I. ORCID: https://orcid.org/0000-0002-3341-4547; Bailey, Mark; Craig, Hayley; Girlanda, Mariangela; Gweon, Hyun Soon ORCID: https://orcid.org/0000-0002-6218-6301; Hallin, Sara; Kaisermann, Aurore; Keith, Aidan M. ORCID: https://orcid.org/0000-0001-9619-1320; Kretzschmar, Marina; Lemanceau, Philippe; Lumini, Erica; Mason, Kelly E.; Oliver, Anna; Ostle, Nick; Prosser, James I.; Thion, Cecile; Thomson, Bruce; Bardgett, Richard D.. 2018 Soil bacterial networks are less stable under drought than fungal networks. Nature Communications, 9, 3033. 12, pp. https://doi.org/10.1038/s41467-018-05516-7

Harrison, Paula ORCID: https://orcid.org/0000-0002-9873-3338; Sier, Andrew; Acreman, Miike; Bealey, Bill ORCID: https://orcid.org/0000-0003-3708-5864; Fry, Matthew ORCID: https://orcid.org/0000-0003-1142-4039; Jones, Laurence ORCID: https://orcid.org/0000-0002-4379-9006; Maskell, Lindsay ORCID: https://orcid.org/0000-0003-4006-7755; May, Linda ORCID: https://orcid.org/0000-0003-3385-9973; Norton, Lisa ORCID: https://orcid.org/0000-0002-1622-0281; Read, Daniel ORCID: https://orcid.org/0000-0001-8546-5154; Reis, Stefan ORCID: https://orcid.org/0000-0003-2428-8320; Trembath, Philip; Watkins, John ORCID: https://orcid.org/0000-0002-3518-8918. 2017 Natural capital metrics. Phase 1 final report: central components. Wallingford, NERC/Centre for Ecology & Hydrology, 79pp. (CEH Project no. C06063) (Unpublished)

Newbold, Lindsay K. ORCID: https://orcid.org/0000-0001-8895-1406; Burthe, Sarah J. ORCID: https://orcid.org/0000-0001-8871-3432; Oliver, Anna E.; Gweon, Hyun G. ORCID: https://orcid.org/0000-0002-6218-6301; Barnes, Christopher J.; Daunt, Francis ORCID: https://orcid.org/0000-0003-4638-3388; van der Gast, Christopher J.. 2017 Helminth burden and ecological factors associated with alterations in wild host gastrointestinal microbiota. ISME Journal, 11 (3). 663-675. https://doi.org/10.1038/ismej.2016.153

Sayer, Emma J.; Oliver, Anna E.; Fridley, Jason D.; Askew, Andrew P.; Mills, Robert T.E.; Grime, J. Philip. 2017 Links between soil microbial communities and plant traits in a species-rich grassland under long-term climate change. Ecology and Evolution, 7 (3). 855-862. https://doi.org/10.1002/ece3.2700

Malik, Ashish A.; Chowdhury, Somak; Schlager, Veronika; Oliver, Anna; Puissant, Jeremy; Vazquez, Perla G.M.; Jehmlich, Nico; von Bergen, Martin; Griffiths, Robert I. ORCID: https://orcid.org/0000-0002-3341-4547; Gleixner, Gerd. 2016 Soil fungal:bacterial ratios are linked to altered carbon cycling. Frontiers in Microbiology, 7, 1247. 11, pp. https://doi.org/10.3389/fmicb.2016.01247

Hänfling, Bernd; Lawson Handley, Lori; Read, Daniel S. ORCID: https://orcid.org/0000-0001-8546-5154; Hahn, Christoph; Li, Jianlong; Nichols, Paul; Blackman, Rosetta C.; Oliver, Anna; Winfield, Ian J. ORCID: https://orcid.org/0000-0001-9296-5114. 2016 Environmental DNA metabarcoding of lake fish communities reflects long-term data from established survey methods. Molecular Ecology, 25 (13). 3101-3119. https://doi.org/10.1111/mec.13660

Cuthbertson, Leah; Rogers, Geraint B.; Walker, Alan W.; Oliver, Anna; Green, Laura E.; Daniels, Thomas W.V.; Carroll, Mary P.; Parkhill, Julian; Bruce, Kenneth D.; van der Gast, Christopher J.. 2016 Respiratory microbiota resistance and resilience to pulmonary exacerbation and subsequent antimicrobial intervention. ISME Journal, 10 (5). 1081-1091. https://doi.org/10.1038/ismej.2015.198

Olsson-Francis, Karen; Pearson, Victoria K.; Schofield, Paul F.; Oliver, Anna; Summers, Stephen. 2016 A study of the microbial community at the interface between granite bedrock and soil using a culture-independent and culture-dependent approach. Advances in Microbiology, 6 (3). 233-245. https://doi.org/10.4236/aim.2016.63023

Olsson-Francis, Karen; Boardman, Carl P.; Pearson, Victoria K.; Schofield, Paul F.; Oliver, Anna; Summers, Stephen. 2015 A culture-independent and culture-dependent study of the bacterial community from the bedrock soil interface. Advances in Microbiology, 5 (13). 842-857. https://doi.org/10.4236/aim.2015.513089

Gweon, Hyun S. ORCID: https://orcid.org/0000-0002-6218-6301; Oliver, Anna; Taylor, Joanne; Booth, Tim; Gibbs, Melanie ORCID: https://orcid.org/0000-0002-4091-9789; Read, Daniel S. ORCID: https://orcid.org/0000-0001-8546-5154; Griffiths, Robert I. ORCID: https://orcid.org/0000-0002-3341-4547; Schonrogge, Karsten ORCID: https://orcid.org/0000-0003-0122-6493. 2015 PIPITS: an automated pipeline for analyses of fungal internal transcribed spacer sequences from the Illumina sequencing platform. Methods in Ecology and Evolution, 6 (8). 973-980. https://doi.org/10.1111/2041-210X.12399

Newbold, Lindsay K. ORCID: https://orcid.org/0000-0001-8895-1406; Oliver, Anna E.; Cuthbertson, Leah; Walkington, Sarah E.; Gweon, Hyun S. ORCID: https://orcid.org/0000-0002-6218-6301; Heard, Matthew S.; van der Gast, Christopher J.. 2015 Rearing and foraging affects bumblebee (Bombus terrestris) gut microbiota. Environmental Microbiology Reports, 7 (4). 634-641. https://doi.org/10.1111/1758-2229.12299

Cuthbertson, Leah; Rogers, Geraint B.; Walker, Alan W.; Oliver, Anna; Hoffman, Lucas R.; Carroll, Mary P.; Parkhill, Julian; Bruce, Kenneth D.; van der Gast, Christopher J.. 2015 Implications of multiple freeze-thawing on respiratory samples for culture-independent analyses. Journal of Cystic Fibrosis, 14 (4). 464-467. https://doi.org/10.1016/j.jcf.2014.10.004

Cutler, Nick A.; Chaput, Dominique L.; Oliver, Anna E.; Viles, Heather A.. 2015 The spatial organization and microbial community structure of an epilithic biofilm. FEMS Microbiology Ecology, 91 (3), fiu027. 9, pp. https://doi.org/10.1093/femsec/fiu027

Oliver, Anna E.; Newbold, Lindsay K. ORCID: https://orcid.org/0000-0001-8895-1406; Whiteley, Andrew S.; van der Gast, Christopher J.. 2014 Marine bacterial communities are resistant to elevated carbon dioxide levels. Environmental Microbiology Reports, 6 (6). 574-582. https://doi.org/10.1111/1758-2229.12159

Cuthbertson, Leah; Rogers, Geraint B.; Walker, Alan W.; Oliver, Anna; Hafiz, Tarana; Hoffman, Lucas R.; Carroll, Mary P.; Parkhill, Julian; Bruce, Kenneth D.; van der Gast, Christopher. 2014 Time between collection and storage significantly influences bacterial sequence composition in sputum samples from cystic fibrosis respiratory infections. Journal of Clinical Microbiology, 52 (8). 3011-3016. https://doi.org/10.1128/JCM.00764-14

Newbold, Lindsay K. ORCID: https://orcid.org/0000-0001-8895-1406. 2014 Microbial community organisation and functioning under ocean acidification conditions. Newcastle University, PhD Thesis, 207pp.

Cutler, Nick A.; Oliver, Anna E.; Viles, Heather A.; Ahmad, Samin; Whiteley, Andrew S.. 2013 The characterisation of eukaryotic microbial communities on sandstone buildings in Belfast, UK, using TRFLP and 454 pyrosequencing. International Biodeterioration & Biodegradation, 82. 124-133. https://doi.org/10.1016/j.ibiod.2013.03.010

Sayer, Emma J.; Wagner, Markus; Oliver, Anna E.; Pywell, Richard F. ORCID: https://orcid.org/0000-0001-6431-9959; James, Phillip; Whiteley, Andrew S.; Heard, Matthew S.. 2013 Grassland management influences spatial patterns of soil microbial communities. Soil Biology and Biochemistry, 61. 61-68. https://doi.org/10.1016/j.soilbio.2013.02.012

Rogers, Geraint B.; Cuthbertson, Leah; Hoffman, Lucas R.; Wing, Peter A.C.; Pope, Christopher; Hooftman, Danny A.P.; Lilley, Andrew K.; Oliver, Anna; Carroll, Mary P.; Bruce, Kenneth D.; van der Gast, Christopher J.. 2013 Reducing bias in bacterial community analysis of lower respiratory infections. ISME Journal, 7 (4). https://doi.org/10.1038/ismej.2012.145

Cutler, Nick A.; Oliver, Anna E.; Viles, Heather A.; Whiteley, Andrew S.. 2012 Non-destructive sampling of rock-dwelling microbial communities using sterile adhesive tape. Journal of Microbiological Methods, 91 (3). 391-398. https://doi.org/10.1016/j.mimet.2012.09.022

Oliver, Anna; Lilley, Andrew K.; van der Gast, Christopher J.. 2012 Species-time relationships for bacteria [Chapter 5]. In: Ogilvie, Lesley A.; Hirsch, Penny R., (eds.) Microbial Ecological Theory: Current Perspectives. Caister Academic Press.

Newbold, Lindsay K. ORCID: https://orcid.org/0000-0001-8895-1406; Oliver, Anna E.; Booth, Tim; Tiwari, Bela; DeSantis, Todd; Maguire, Michael; Andersen, Gary; van der Gast, Christopher J.; Whiteley, Andrew S.. 2012 The response of marine picoplankton to ocean acidification. Environmental Microbiology, 14 (9). 2293-2307. https://doi.org/10.1111/j.1462-2920.2012.02762.x

Yilmaz, Pelin; Kottmann, Renzo; Field, Dawn; Knight, Rob; Cole, James R.; Amaral-Zettler, Linda; Gilbert, Jack A.; Karsch-Mizrachi, Ilene; Johnston, Anjanette; Cochrane, Guy; Vaughan, Robert; Hunter, Christopher; Park, Joonhong; Morrison, Norman; Rocca-Serra, Philippe; Sterk, Peter; Arumugam, Manimozhiyan; Bailey, Mark; Baumgartner, Laura; Birren, Bruce W.; Blaser, Martin J.; Bonazzi, Vivien Bonazzi; Booth, Tim; Bork, Peer; Bushman, Frederic D.; Buttigieg, Pier Luigi; Chain, Patrick S.G.; Charlson, Emily; Costello, Elizabeth K.; Huot-Creasy, Heather; Dawyndt, Peter; DeSantis, Todd; Fierer, Noah; Fuhrman, Jed A.; Gallery, Rachel E.; Gevers, Dirk; Gibbs, Richard A.; Gil, Inigo San; Gonzalez, Antonio; Gordon, Jeffrey I.; Guralnick, Robert; Hankeln, Wolfgang; Highlander, Sarah; Hugenholtz, Philip; Jansson, Janet; Kau, Andrew L.; Kelley, Scott T.; Kennedy, Jerry; Knights, Dan; Koren, Omry; Kuczynski, Justin; Kyrpides, Nikos; Larsen, Robert; Lauber, Christian L.; Legg, Teresa; Ley, Ruth E.; Lozupone, Catherine A.; Ludwig, Wolfgang; Lyons, Donna; Maguire, Eamonn; Methé, Barbara A.; Meyer, Folker; Muegge, Brian; Nakielny, Sara; Nelson, Karen E.; Nemergut, Diana; Neufeld, Josh D.; Newbold, Lindsay K. ORCID: https://orcid.org/0000-0001-8895-1406; Oliver, Anna E.; Pace, Norman R.; Palanisamy, Giriprakash; Peplies, Jörg; Petrosino, Joseph; Proctor, Lita; Pruesse, Elmar; Quast, Christian; Raes, Jeroen; Ratnasingham, Sujeevan; Ravel, Jacques; Relman, David A.; Assunta-Sansone, Susanna; Schloss, Patrick D.; Schriml, Lynn; Sinha, Rohini; Smith, Michelle I.; Sodergren, Erica; Spor, Aymé; Stombaugh, Jesse; Tiedje, James M.; Ward, Doyle V.; Weinstock, George M.; Wendel, Doug; White, Owen; Whiteley, Andrew; Wilke, Andreas; Wortman, Jennifer R.; Yatsunenko, Tanya; Glöckner, Frank Oliver. 2011 Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications. Nature Biotechnology, 29 (5). 415-420. https://doi.org/10.1038/nbt.1823

Mary, Isabelle; Oliver, Anna; Skipp, Paul; Holland, Ross; Topping, Juliette; Tarran, Glen; Scanlan, David J.; O'Connor, C. David; Whiteley, Andrew S; Burkill, Peter H.; Zubkov, Mikhail. 2010 Metaproteomic and metagenomic analyses of defined oceanic microbial populations using microwave cell fixation and flow cytometric sorting. FEMS Microbiology Ecology, 74. 10-18. https://doi.org/10.1111/j.1574-6941.2010.00927.x

Temperton, Ben; Field, Dawn; Oliver, Anna; Tiwari, Bela; Muhling, Martin; Joint, Ian; Gilbert, Jack A.. 2009 Bias in assessments of marine microbial biodiversity in fosmid libraries as evaluated by pyrosequencing. ISME Journal, 3. 792-796. https://doi.org/10.1038/ismej.2009.32

Cunliffe, Michael; Whiteley, Andrew S.; Newbold, Lindsay ORCID: https://orcid.org/0000-0001-8895-1406; Oliver, Anna; Schafer, Hendrik; Murrell, J. Colin. 2009 Comparison of bacterioneuston and bacterioplankton dynamics during a phytoplankton bloom in a fjord mesocosm. Applied and Environmental Microbiology., 75 (22). 7173-7181. https://doi.org/10.1128/AEM.01374-09

Gilbert, Jack A.; Field, Dawn; Swift, Paul; Newbold, Lindsay ORCID: https://orcid.org/0000-0001-8895-1406; Oliver, Anna; Smyth, Tim; Somerfield, Paul J.; Huse, Sue; Joint, Ian. 2009 The seasonal structure of microbial communities in the Western English Channel. Environmental Microbiology, 11. 3132-3139. https://doi.org/10.1111/j.1462-2920.2009.02017.x

Tett, Adrian; Spiers, Andrew J.; Crossman, Lisa C.; Ager, Duane; Ciric, Lena; Dow, J. Maxwell; Fry, John C.; Harris, David; Lilley, Andrew; Oliver, Anna; Parkhill, Julian; Quail, Michael A.; Rainey, Paul B.; Saunders, Nigel J.; Seeger, Kathy; Snyder, Lori A. S.; Squares, Rob; Thomas, Christoper M.; Turner, Sarah L.; Zhang, Xue-Xian; Field, Dawn; Bailey, Mark J.. 2007 Sequence-based analysis of pQBR103; a representative of a unique, transfer-proficient mega plasmid resident in the microbial community of sugar beet. ISME Journal, 1 (4). 331-340. https://doi.org/10.1038/ismej.2007.47