Respiration rates of marine prokaryotes and implications for the in vivo INT method

Seguro, Isabel ORCID: https://orcid.org/0000-0001-8453-0057; Vikström, Kevin; Todd, Jonathan D.; Giovannoni, Stephen J.; García-Martín, E. Elena ORCID: https://orcid.org/0000-0003-4807-3287; Utting, Robert; Robinson, Carol ORCID: https://orcid.org/0000-0003-3033-4565. 2025 Respiration rates of marine prokaryotes and implications for the in vivo INT method. Biogeosciences, 22 (21). 6225-6242. 10.5194/bg-22-6225-2025

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Abstract/Summary

The balance between the uptake of CO2 by phytoplankton photosynthesis and the production of CO2 from prokaryoplankton, zooplankton and phytoplankton respiration controls how much carbon can be stored in the ocean and hence how much remains in the atmosphere to affect climate. Yet, despite its crucial role, knowledge on the respiration of plankton groups is severely limited because traditional methods cannot differentiate the respiration of constituent groups within the plankton community. The reduction of the iodonitrotetrazolium salt (INT) to formazan, which when converted to oxygen consumption (O2C) using an appropriate conversion equation, provides a proxy for both total and size fractionated plankton respiration. However, the method has not been thoroughly tested with prokaryoplankton. Here we present respiration rates, as O2C and formazan formation (INTR), for a wide range of relevant marine prokaryoplankton including the gammaproteobacteria Halomonas venusta, the alphaproteobacteria Ruegeria pomeroyi and Candidatus Pelagibacter ubique (SAR11), the actinobacteria Agrococcus lahaulensis, and the cyanobacteria Synechococcus marinus and Prochlorococcus marinus. All species imported and reduced INT, but the relationship between the rate of O2C and INTR was not constant between oligotrophs and copiotrophs. The range of measured O2C  INTR conversion equations equates to an up to 40-fold difference in derived O2C. These results suggest that when using the INT method in natural waters, a constant O2C  INTR relationship cannot be assumed, but must be determined for each plankton community studied.

Item Type:	Publication - Article
Digital Object Identifier (DOI):	10.5194/bg-22-6225-2025
ISSN:	1726-4189
NORA Subject Terms:	Marine Sciences
Date made live:	20 Nov 2025 16:46 +0 (UTC)
URI:	https://nora.nerc.ac.uk/id/eprint/540616

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