Bagnara, Maurizio; Van Oijen, Marcel; Cameron, David; Gianelle, Damiano; Magnani, Federico; Sottocornola, Matteo. 2018 Bayesian calibration of simple forest models with multiplicative mathematical structure: a case study with two Light Use Efficiency models in an alpine forest. Ecological Modelling, 371. 90-100. 10.1016/j.ecolmodel.2018.01.014
Abstract
Forest models are increasingly being used to study ecosystem functioning, through simulation of carbon fluxes
and productivity in different biomes and plant functional types all over the world. Several forest models based on
the concept of Light Use Efficiency (LUE) rely mostly on a simplified mathematical structure and empirical
parameters, require little amount of data to be run, and their computations are usually fast. However, possible
calibration issues must be investigated in order to ensure reliable results.
Here we addressed the important issue of delayed convergence when calibrating LUE models, characterized
by a multiplicative structure, with a Bayesian approach. We tested two models (Prelued and the Horn and Schulz
(2011a) model), applying three Markov Chain Monte Carlo-based algorithms with different number of iterations,
and different sets of prior parameter distributions with increasing information content. The results showed that
recently proposed algorithms for adaptive calibration did not confer a clear advantage over the
Metropolis–Hastings Random Walk algorithm for the forest models used here, and that a high number of
iterations is required to stabilize in the convergence region. This can be partly explained by the multiplicative
mathematical structure of the models, with high correlations between parameters, and by the use of empirical
parameters with neither ecological nor physiological meaning. The information content of the prior distributions
of the parameters did not play a major role in reaching convergence with a lower number of iterations.
We conclude that there is a need for a more careful approach to calibration to solve potential problems when
applying models characterized by a multiplicative mathematical structure. Moreover, the calibration proved
time consuming and mathematically difficult, so advantages of using a computationally fast and user-friendly
model were lost due to the calibration process needed to obtain reliable results.
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Available under License Creative Commons Attribution Non-commercial No Derivatives 4.0.
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UKCEH and CEH Science Areas 2017-24 (Lead Area only) > Atmospheric Chemistry and Effects
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