Sequence and organization of the complete mitochondrial genome of the marsh tit Poecile palustris (Aves: Paridae)

Day, John C. ORCID: https://orcid.org/0000-0002-5483-4487; Broughton, Richard K. ORCID: https://orcid.org/0000-0002-6838-9628; Hinsley, Shelley A.. 2016 Sequence and organization of the complete mitochondrial genome of the marsh tit Poecile palustris (Aves: Paridae). Mitochondrial DNA Part A, 27 (5). 3212-3213. 10.3109/19401736.2015.1007351

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Abstract/Summary

The complete mitochondrial genome of the marsh tit Poecile palustris (Linnaeus, 1758) was sequenced using a combined Illumina and Sanger sequencing approach. Using the known sequence of Poecile atricapillus Linnaeus, 1766 (Paridae) homologous NGS reads were identified and assembled. The genome is 16,824 bp in length and includes 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes and a control region. Gene order resembles that of the standard avian gene order. The base composition of the genome is A (29.15%), T (22.50%), C (33.61%) and G (14.73%). The control region between tRNA(Glu) and tRNA(Phe) is composed of 1240 bp with no obvious repetitive motifs.

Item Type:	Publication - Article
Digital Object Identifier (DOI):	10.3109/19401736.2015.1007351
UKCEH and CEH Sections/Science Areas:	Pywell Reynard
ISSN:	2470-1394
Additional Keywords:	marsh tit, mitochondrial genome, paridae, Poecile atricapillus, Poecile palustris
NORA Subject Terms:	Zoology Biology and Microbiology
Date made live:	11 Jul 2016 11:59 +0 (UTC)
URI:	https://nora.nerc.ac.uk/id/eprint/513943

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