Vertical imbalance in organic carbon budgets is indicative of a missing vertical transfer during a phytoplankton bloom near South Georgia (COMICS)

The biological carbon pump, driven principally by surface production and sinking of organic matter to deep water and its subsequent remineralization to CO2 maintains atmospheric CO2 around 200 ppm lower than it would be if the ocean were abiotic. One important driver of the magnitude of this effect is the depth to which organic matter sinks before it is remineralised, a parameter we have limited confidence in measuring given the difficulty involved in balancing sources and sinks in the ocean's interior. This imbalance is due, in part, to our inability to measure respiration directly and our reliance on radiotracer-based proxies. One solution to these problems might be a temporal offset in which organic carbon accumulates in the mesopelagic zone (100–1000 m depth) early in the productive season prior to it being consumed later, a situation which could lead to a net apparent sink occurring if a steady state assumption is applied as is often the approach. In this work, we develop a novel accounting method to address this issue, independent of respiration measurements, by estimating fluxes into and accumulation within distinct vertical layers in the mesopelagic. We apply this approach to a time series of measurements of particle sinking velocities and interior organic carbon concentrations made during the declining phase of a large diatom bloom in a low-circulation region of the Southern Ocean downstream of South Georgia. Our data show that the major export event led to a significant accumulation of organic matter in the upper mesopelagic (100–200 m depth) which declined over several weeks, implying that temporal offsets need to be considered when compiling budgets. However, even when accounting for this accumulation, a mismatch in the vertically resolved organic carbon budget remained, implying that there are likely widespread processes that we do not yet understand that redistribute material vertically in the mesopelagic.